Package - ERIC

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Microbial Community Assembly
Data for: Timing of antibiotic administration determines the spread of plasmid-encoded antibiotic resistance during microbial range expansion

Plasmids are the main vector by which antibiotic resistance is transferred between bacterial cells within surface-associated communities. In this study, we ask whether there is...

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Molecular Toxicology
Data for: Sub-Lethal Peak Exposure to Insecticides Triggers Olfaction-Mediated Avoidance in Zebrafish Larvae

In agricultural areas, insecticides inevitably reach water bodies via leaching or run-off. While designed to be neurotoxic to insects, insecticides have adverse effects on a...

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Ecotox Centre
Data for: Estrogenic activity of food contact materials-evaluation of 20 chemicals using a yeast estrogen screen on HPTLC or 96-well plates

This package contains data and code used in the publication with the following abstract. Food contact materials (FCM) may contain complex mixtures of estrogenic chemicals. A...

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Microbial Community Assembly
Data for: Fungal hyphae regulate bacterial diversity and plasmid-mediated functional novelty during range expansion

The amount of bacterial diversity present on many surfaces is enormous, yet how these levels of diversity persist in the face of the purifying processes that occur as bacterial...

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Microbial Community Assembly
Data for: Rare and localized events stabilize microbial community composition and patterns of spatial self-organization in a fluctuating environment

Spatial self-organization is a hallmark of surface-associated microbial communities that is governed by local environmental conditions and further modified by interspecific...

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Microbial Community Assembly
Data for: Denitrification in low oxic environments increases the accumulation of nitrogen oxide intermediates and modulates the evolutionary potential of microbial populations

Denitrification in oxic environments occurs when a microorganism uses nitrogen oxides as terminal electron acceptors even though oxygen is available. While this phenomenon is...

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Microbial Community Assembly
Data for: Evaporation-induced hydrodynamics control plasmid transfer during surface-associated microbial growth

Droplet evaporation is a general process in unsaturated environments that results in micro-scale hydrodynamic flows which in turn determine the spatial distributions of...

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Microbial Community Assembly
Data for: Phage predation accelerates the spread of plasmid-encoded antibiotic resistance

The spread of antibiotic resistance is an emerging health crisis. Here, we demonstrate that phage predation can increase the transfer and proliferation of plasmid-encoded...

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Data Science for Environmental Research
Data for: A Benchmark Dataset for Machine Learning in Ecotoxicology

The publication provides and describes a clean and expert-curated benchmark dataset to be used for machine-learning-based research in ecotoxicology. The package contains several...

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Microbial Community Assembly
Data for: Metabolic interactions regulate the transfer and proliferation of plasmid-encoded antibiotic resistance during surface-associated microbial growth

Surface-associated microbial systems are hotspots for the spread of plasmid-encoded antibiotic resistance, but how surface association affects plasmid transfer and proliferation...

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Microbial Community Assembly
Data for: Fungal hyphae promote bacterial contact-dependent killing during surface-associated growth

Bacterial contact-dependent killing in spatially structured systems is shaped by physical constraints and biological interactions. In this study, we demonstrate the importance...

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Microbial Community Assembly
Data for: Phage-mediated peripheral kill-the-winner facilitates the maintenance of costly antibiotic resistance

The persistence of antibiotic resistant (AR) bacteria in the absence of antibiotic pressure raises a paradox regarding the fitness costs associated with antibiotic resistance....

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Microbial Community Assembly
Data for: Evaporation controls contact-dependent bacterial killing during surface-associated growth

Many bacteria employ contact-dependent killing mechanisms, which require direct physical contact with a target cell, to gain an advantage over competitors. Here, we hypothesize...

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